Publications
2013
Dehof, AK, Loew, S, Lenhof, H, and Hildebrandt, A
(2013).
NightShift: NMR Shift Inference by General Hybrid Model Training - a Framework for NMR Chemical Shift Prediction.
BMC Bioinformatics, 14(1):98.
2012
Benz, F, Hildebrandt, A, and Hack, S
(2012).
A Dynamic Program Analysis to find Floating-Point Accuracy Problems
In: PLDI '12: Proceedings of the 2012 ACM SIGPLAN Conference on Programming Language Design and Implementation.
Krupp, M, Itzel, T, Maass, T, Hildebrandt, A, Galle, PR, and Teufel, A
(2012).
CellLineNavigator: a workbench for cancer cell line analysis
Nucleic acids research.
Becker, D, Sfakianakis, I, Krupp, M, Staib, F, Gerhold-Ay, A, Victor, A, Binder, H, Blettner, M, Maass, T, Thorgeirsson, S, Galle, PR, and Teufel, A
(2012).
Genetic signatures shared in embryonic liver development and liver cancer define prognostically relevant subgroups in HCC
Molecular cancer, 11(1):55.
Teufel, A, Becker, D, Weber, SN, Dooley, S, Breitkopf-Heinlein, K, Maass, T, Hochrath, K, Krupp, M, Marquardt, JU, Kolb, M, Korn, B, Niehrs, C, Zimmermann, T, Godoy, P, Galle, PR, and Lammert, F
(2012).
Identification of RARRES1 as a core regulator in liver fibrosis
Journal of Molecular Medicine (Berlin, Germany).
Slawski, M, Hussong, R, Tholey, A, Jakoby, T, Gregorius, B, Hildebrandt, A, and Hein, M
(2012).
Isotope pattern deconvolution for peptide mass spectrometry by non-negative least squares/least absolute deviation template matching.
BMC Bioinformatics, 13:291.
Dietzen, M, Zotenko, E, Hildebrandt, A, and Lengauer, T
(2012).
On the applicability of elastic network normal modes in small-molecule docking.
J Chem Inf Model, 52(3):844-56.
Nickels, S, Sminia, H, Mueller, S, Kools, B, Dehof, AK, Lenhof, H, and Hildebrandt, A
(2012).
ProteinScanAR - An augmented reality web application for high school education in biomolecular life sciences
In: Proceedings of the 6th International Symposium on Information Visualization in Biomedical Informatics (IVBI) 2012.
Krupp, M, Marquardt, JU, Sahin, U, Galle, PR, Castle, J, and Teufel, A
(2012).
RNA-Seq Atlas – A reference database for gene expression profiling in normal tissue by next generation sequencing
Bioinformatics.
2011
Bardhan, JP and Hildebrandt, A
(2011).
A Fast Solver for Nonlocal Electrostatic Theory in Biomolecular Science and Engineering
In: Design Automation Conference (DAC), 2011 48th ACM/EDAC/IEEE.
Rey, JW, Schreiner, O, Barreiros, AP, Heise, M, Krupp, M, Schuchmann, M, Otto, G, Galle, PR, and Teufel, A
(2011).
Acute renal failure and liver dysfunction after subcutaneous injection of 3-sn-phosphatidylcholine (Lipostabil®)-case report.
Z Gastroenterol, 49:340-343.
Dehof, AK, Rurainski, A, Bui, QB, Böcker, S, Lenhof, H, and Hildebrandt, A
(2011).
Automated bond order assignment as an optimization problem
Bioinformatics, 27(5):619-625.
Kneissl, B, Müller, SC, Tautermann, CS, and Hildebrandt, A
(2011).
String Kernels and High-Quality Data Set for Improved Prediction of Kinked Helices in α-Helical Membrane Proteins
Journal of Chemical Information and Modeling, 51(11):3017-3025.
Krupp, M, Maass, T, Marquardt, JU, Staib, F, Tobias, B, König, R, Biesterfeld, S, Galle, PR, Tresch, A, and Teufel, A
(2011).
The functional cancer map: a systems-level synopsis of genetic deregulation in cancer.
BMC Med Genomics, 4:53.
Fundamentals of Theoretical Computer Science I (Lecture)
